Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs12467831 chr2:30738467 C/T 1.4E-8 118 37.37 50.1 33.13 KM Plot
THYM rs12468971 chr2:30739441 C/T 1.86E-8 117 36.4 50.1 33.13 KM Plot
THYM rs12469630 chr2:30840070 C/T 1.54E-8 118 36.03 50.1 33.13 KM Plot
THYM rs12469745 chr2:30840392 C/T 1.54E-8 118 36.03 50.1 33.13 KM Plot
THYM rs12469849 chr2:30685404 C/T 1.5E-8 118 38.33 50.07 33.13 KM Plot
THYM rs12471248 chr2:30702449 A/G 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs12471868 chr2:30863108 A/G 1.38E-8 119 36.03 50.13 33.13 KM Plot
THYM rs12474202 chr2:30789880 C/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs12475104 chr2:30790239 C/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs12476387 chr2:30791618 C/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs12476392 chr2:30791661 C/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs12476805 chr2:30721802 C/A 1.48E-8 118 37.37 50.1 33.13 KM Plot
THYM rs12477267 chr2:30772157 T/C 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs12478778 chr2:30783259 C/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs12479642 chr20:29509957 G/A 2.67E-13 118 38.13 50.53 6 KM Plot